Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIPEKKSIAIMKELSIGNTKQMLMINGVDVKNPLLLFLHGGPGTPQIGYVRHYQKELEQYFTVVHWDQRGSGLSYSKRIS-HHSMTINHFIKDTIQVTQWLLAHFSKSKLYLAGHSWGSILALHVLQQRPDLFYTYYGISQVVNPQDEESTAYQHIREISESKKASILSFLTRFIGAPPWKQDIQHLIYRFCVELTRGGFTHRHRQSLAVLFQMLTGNEYGVRNMHSFLNGLRFSKKHLTDELYRFNAFTSVPSIKVPCVFISGKHDLIVPAEISKQYYQELEAPEKRWFQFENSAHTPHIEEPSLFANTLSRHARHHL |
| 3W04 Chain:A ((8-265)) | --------------------LNVRVVGS--GERVVVLSHGFGTDQSA-WSR-VLPYLTRDHRVVLYDLVCAGSVNPDHFDFRRYDNLDAYVDDLLAILDAL----RIPRCAFVGHSVSAMIGILASIRRPDLFAKLVLIGASPRFLNDSDYHGGFELEEI----QQVFDA---M-GA-NY--------SAWATGYAPLAVGADVPAAV---QEFS-------RTLFNM-RP-DISL-HVCQTVFKTDLRGVLGMVRAPCVVVQTTRDVSVPASVAAYLKAHLG-GRTTVEFLQTEGHLPHLSAPSLLAQVLRRALAR-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3W04.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -144484 for 2219 contacts (-65.1/contact) +
2D Compatibility (PS) -26582 + (NN) -8945 + (LL) 4864
1D Compatibility (HY) -11600 + (ID) 2150
Total energy: -188897.0 ( -85.13 by residue)
QMean score : 0.350
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