Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTKGILGRKIGMTQVFAENG----------DLIPVTVIEAAPNVVLQKKTAENDGYE--AIQLGFDDKR----EKLSNKP-------------------E------KGHVAK------------------AET-APKRFVKELRGVEMD--------AYEVGQEVKV-EIFSAGEIVDVTGVSKGKGFQGAIKRHGQSRGPMSHGSRYHRRPGSMGPVDPNRVFKGKLLPGRMGGEQITVQNLEIVKVDA-----------------------------------ERNLLLIKGNVPGAKKSLITVKSAVKSK |
5AN9 Chain:A ((42-352)) | HLTAFMGYKAGMTHVVRDLEKPGSKMHKKEIVEAVTIIECPPMYIVGLVGYVETAQGLKTYKTVWAQHLSDNFRRRLYKNWYKSKSKKAFTKYVKQYETEEGKKSIEASLQAIKKRCSVVRVIAHTQVHKLKLTQKKAHVLEIQVNGGSIVEKVNFAVANFEKTVNVTGVFAENELIDVIGVTKGKGFNGVIKRWGVRKLPRKTH-KGLRKVACIGAWHPSRVSTTVPRAGQLGYHHRVERNKKIYRIGQAQPEDGKQISTGKTEFDLTEKTINPMGGFAHYGMVKHEFLMLKGCVAGPRKRALTLRKSITT- |
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General information:
TITO was launched using:
| RESULT:
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Template: 5AN9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -20671 for 1261 contacts (-16.4/contact) +
2D Compatibility (PS) -21698 + (NN) -718 + (LL) 36
1D Compatibility (HY) -9600 + (ID) 2550
Total energy: -55201.0 ( -43.78 by residue)
QMean score : 0.327
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