Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNLVLMGLPGAGKGTQGERIVEDYGIPHISTGDMFRAAMKEETPLGLEAKSYIDKGELVPDEVTIGIVKERLGKDDC-ERGFLLDGFPRTVAQAEALEEILEEYGKPIDYVINIEVDKDVLMERLTGRRICSVCGTTYHLVFNPPKTPGICDKDGGELYQRADDNEETVSKRLEVNMKQTQPLLDFYSEKGYLANVNGQQDIQDVYADVKDLLGGLKK
4W5H Chain:A ((6-216))
MNLLIMGLPGAGKGTQAAKIVEQFHVAHISTGDMFRAAMANQTEMGVLAKSYIDKGELVPDEVTNGIVKERLSQDDIKETGFLLDGYPRTIEQAHALDKTLAELGIELEGIINIEVNPDSLLERLSGRIIHRVTGETFH-----P-----VDYKEEDYYQREDDKPETVKRRLDVNIAQGEPIIAHYRAKGLVHDIEGNQDINDVFSDIEKVLTNL--
General information:
TITO was launched using:
RESULT:
Template:
4W5H.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -89250 for 1482 contacts (-60.2/contact) +
2D Compatibility (PS) -23084 + (NN) -15902 + (LL) 416
1D Compatibility (HY) -22800 + (ID) 5900
Total energy: -156520.0 ( -105.61 by residue)
QMean score : 0.622
(partial model without unconserved sides chains):
PDB file :
Tito_4W5H.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4W5H-query.scw
PDB file :
Tito_Scwrl_4W5H.pdb
: