Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKGSLSEH-KAGNRRFTLYLPPSYST-----DSGGFPAVYVQDGSSLFQNQI-E--LLESAFQQQRLPELVLIGIEPENRLDEYTPWPAASLSDRFTDFGGMGYHYLSDITNQFIPLIEENWNV-TREPQSRGMIGASLGGLISMFAILKYPSMFGKIGSISGSYWYENAAE---------TI-----------------HIS-SLKPGTARVFMSIGSEEGREKQSIQRHMLKKTKQVHQSLKEKGFTEDQLCLSIEKGAVHHHKYFCKQFINALEWLYGKNRSTL |
| 4ROT Chain:A ((13-262)) | --IEYHSVVLGMERKVNVIYPDQSEIPKKDQGDKDIPVLYLLHGMGGNENSWQKRTAIERLLRH---TNLIVVMPSTDLG--WYTDTA-------------YGLNYYRALSQELPQVLAAFFPNMTQKREKTFVAGLSMGGYGAFKWALKS-NRFSYAASFSGALDFSPETNLEGNLGELAYWQGVFGQFEDPDLDKHYLKNMVAESDGKTKFYAWCGYEDFL---------FATNEKAIADFQAQGLD---IDYHKGHG-KHEWYYWNQQLEVLLEWLPINYQ--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4ROT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -90141 for 1707 contacts (-52.8/contact) +
2D Compatibility (PS) -22745 + (NN) -10555 + (LL) 2384
1D Compatibility (HY) -9600 + (ID) 1750
Total energy: -132407.0 ( -77.57 by residue)
QMean score : 0.447
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