Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKIYGIYMDRPLSQEETDRLMSFVSAEKREKCRRFYHKEDAHRTLLGDVLVRSVISEQYQLNKADIRFSAQEYGKPCIPDLPNAHFNISHSGHWVIGAFDSDPIGVDIEKMKPISLGIAERFFSKNEYSDLLSKHKDEQNDYFYHLWSMKESFIKQEGKGLSLPLDSFSVRLHEDGRVSVELPEHHTPCFIKTYEVDPGYKMAVCAARPDFPEDITMISYEALL----
1QR0 Chain:A ((1-228))
MKIYGIYMDRPLSQEENERFMTFISPEKREKCRRFYHKEDAHRTLLGDVLVRSVISRQYQLDKSDIRFSTQEYGKPCIPDLPDAHFNISHSGRWVIGAFDSQPIGIDIEKTKPISLEIAKRFFSKTEYSDLLAKDKDEQTDYFYHLWSMKESFIKQEGKGLSLPLDSFSVRLHQDGQVSIELPDSHSPCYIKTYEVDPGYKMAVCAAHPDFPEDITMVSYEELLRAAA
General information:
TITO was launched using:
RESULT:
Template:
1QR0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -127906 for 1651 contacts (-77.5/contact) +
2D Compatibility (PS) -24361 + (NN) -14407 + (LL) 0
1D Compatibility (HY) -31200 + (ID) 9650
Total energy: -207524.0 ( -125.70 by residue)
QMean score : 0.466
(partial model without unconserved sides chains):
PDB file :
Tito_1QR0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1QR0-query.scw
PDB file :
Tito_Scwrl_1QR0.pdb
: