Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKISLTLLILLLALTAAACGSKNESTASKASGTASEKKKIEYLDKTYEVTVPTDKIAITGSVESMEDAKLLDVHPQGAISFSG--KFPDMFKDITDKAEPTGEKMEPNIEKILEMKPDVILASTKFPEKTLQKISTAGTTIPVSHISSNWKENMMLLAQLTGKEKKAKKIIADYEQDLKEIKTKINDKA---KDSKALVIRIRQGNIYIYPEQVYFNSTLYGDLGLKAPNEVKA-----AKAQELSSLEKLSEMNPDHIFVQFSDDENAD---KPDALKDLEKNPIWKSLKAVKEDHVYV-NSVDPL--AQGGTAWSKVRFLKAAAEKLTQN |
| 3MWF Chain:A ((5-293)) | -------------------------------------TTSIKHAMGTTEIKGKPKRV-VTLYQGATDVAVSLGVKPVGAVESWTQKPKFEYIKNDLKDTKIVGQEPAPNLEEISKLKPDLIVASKVRNEKVYDQLSKIAPTVSTDTV-FKFKDTTKLMGKALGKEKEAEDLLKKYDDKVAAFQKDAKAKYKDAWPLKASVVNFRADHTRIYAG-GYAGE-ILNDLGFKRNKDLQKQVDNGKDIIQLTSKESIPLMNADHIFVVKSDPNAKDAALVKKTESEWTSSKEWKNLDAVKNNQVSDDLDEITWNLAGGYKSSLKL--IDDLYEKLNI- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3MWF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -44402 for 2331 contacts (-19.0/contact) +
2D Compatibility (PS) -30074 + (NN) -18212 + (LL) 3432
1D Compatibility (HY) -8800 + (ID) 3600
Total energy: -101656.0 ( -43.61 by residue)
QMean score : 0.523
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