Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --MRKTIFAFL--TGLMMFGTITAASASPDSKNQTAKKPKVQTGIDTLLPDYKKQLKG--KRIGLITNPAGVNTSLKSSVD---------------ILYENPDIKLTALFGPEHGVRGDAQAGDEV--------GSYIDE--------------------------------KTGVPVYSLYGKTKKPTPEMLKNVDILMFDIQDVGTRFYTYIY-----------TMAYAMEAAKENGIPFMVLDRPNPQGGNHIEGPILEPEYAS-FVGLYPIPLKHGMTIGELASLF---------NKEFSIDADLTVVKMKHWKRKMDFDDTRLPFVLPSPNMPTVESTFVYPATGL--------------IEGTNISEGRGTTKPFELIGAPFIKSTELEETLNSLHLPGVTFRAASFTPTFSKHQ---GTLCHGVQLYVTDRDKFEA--VKTGLSVIKTIHDLYPEDFEFLSTGSFDKLAGNGWIRTKIENGTSVENIINSYEKTLQQFSK------------TRKKYLIY--------------------------------------------------------- |
| 3J5P Chain:A ((111-729)) | LYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLL-VENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALAASSGKIGVLAYILQREIHEPECRHLSRKFTEWAYGPVHSSLYDLSCIDTCEKNSVLEVIAYSSSETPNRHDMLLVEPLNRLLQDKWDRFVKRIFYFNFFVYCLYMIIFTAAAYYRPVEGLPPYKLKNTVGDYFRVTGEILSVSGGVYFFFRGIQYFLQRRPSVDSYSEILFFVQSLFMLVSVVLYFSQRKEYVASMVFSLAMGWTNMLYYTRGFQQMGIYAVMIEKMILRDLCRFMFVYLVFLFGFSTAVVTLIEDGKY--NSLYSTCLELFKFTIGMGDLEFTENYDFKAVFIILLLAYVILTYILLLNMLIALMGETVNKIAQESKNIWKLQRAITILDTEKSFLKCMRKA |
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General information:
TITO was launched using:
| RESULT:
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Template: 3J5P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -6946 for 2625 contacts (-2.6/contact) +
2D Compatibility (PS) -41470 + (NN) -1585 + (LL) 124
1D Compatibility (HY) -22400 + (ID) 3550
Total energy: -75827.0 ( -28.89 by residue)
QMean score : 0.011
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