Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKTKTLFIFSAILTLSIFAPNETFAQTAGNLIEPKIINAETAQFSTKKLRKVDQMIERDIAAGFPGAVLVVVKDGRIIKKAAYGYSKKYEGSELLRRPAKMKTRTMFDLASNTKMYATNFALQRLVSQGKLDVYEKVSAYLPGFKDQPGDLIKGKDKIRVIDVLQHQSGLPSSFYFYTPEK-----AGKYYSQERDKTIEYLTKIPLDYQTGTKHVYSDIGYMLLGCIVEKLTGKPLDVYTEQELYKPLRLKHTLYNPLQKGFKPKQFAATERMGNTRDGVIQFPNIRTNTLQGEVHDEKAFYSMDGVSGHAGLFSNADDMAILLQVMLNKGSYRNISLFDQKTADLFTAPSA--TDPTFALGWRRNGSKSMEWMFGPHASENAYGHTGWT---GTVTIIDPAYNLGIALLTNKKHTPVIDPEENPNVFEGDQFPTGSYGSVITAIYEAME |
| 1YQS Chain:A ((6-330)) | ----------------------------------------------PDDTGLQAVLHTALSQGAPGAMVRVDDNGT-IHQLSEGVADR-------ATGRAITTTDRFRVGSVTKSFS-AVVLLQLVDEGKLDLDASVNTYLPGLLP--------DDRITVRQVMSHRSGLYDYTNDMFAQTVPGFESVRNKVFSYQDLITLSLKHGVTNAPGAAYSYSNTNFVVAGMLIEKLTGHSVATEYQNRIFTPLNLTDTFYVHPDTVI-PGTHAN----GYLTPDEA-----G-----GALVD-STEQTVSWAQSAGAVISSTQDLDTFFSALMSG------QLMSAAQLAQMQQWTTVNSTQGYGLGLRRRDLS---------CGISVYGHTGTVQGYYTYAFASKDGKRSVTALANTSNNVN-------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1YQS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -109071 for 2769 contacts (-39.4/contact) +
2D Compatibility (PS) -33508 + (NN) -14994 + (LL) 7900
1D Compatibility (HY) -12000 + (ID) 3450
Total energy: -165123.0 ( -59.63 by residue)
QMean score : 0.501
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