Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEMMIKKRIKQVKKGDQDAFADIVDIYKDKIYQLCYRMLG---NVHEAEDIAQEAFIRAYVNIDSFDI--NRKFSTWLYRIATNLTIDRIRKKKPDYYLD--------------------AEVAGT---------EG------------LTMYSQI-----------VADGVLPEDAVVSLELSNTIQQKILKLPDKYRTVIVLKYIDELSLIEIGEILNIPVGTVKTRIHRGREALRKQLRDL |
1RP3 Chain:A ((3-234)) | -----------NPYSNQIEREELILKYLPLVKAIATNIKKHLPEDVDIRDLISYGVIGLIKAVDNLSTENPKRAEAYIKLRIKGAIYDYLRSLDFGSRQVREKERRIKEVVEKLKEKLGREPTDEEVAKELGISTEELFKTLDKINFSYILSLEEVFRDFARDYSELIPSSTNVEEEVIKRELTEKVKEAVSKLPEREKLVIQLIFYEELPAKEVAKILETSVSRVSQLKAKALERLREMLSN- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1RP3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -63539 for 1091 contacts (-58.2/contact) +
2D Compatibility (PS) -18337 + (NN) -4774 + (LL) 1724
1D Compatibility (HY) -4000 + (ID) 1450
Total energy: -90376.0 ( -82.84 by residue)
QMean score : 0.388
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