Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPDSINNGHKESHDHRISNDAEMITDEKWQAIINNDAAYNNQFFYAVKSTGIFCKPSCKSRVPKKENVCIFPNTEQALRANFRPCKRCKPTNEKMPDSEWVDLITEYIDKNFTEKLTLESLADICHGSPYHMHRTFKKIKGITLVEYIQQVRVHAAKKYLIQTNKAIGDIAICVGIANAPYFITLFKKKTGQTPARFRQMSKMEETYNGNK
1D5Y Chain:A ((4-109))
---------------------------------------------------------------------------------------------------IIRDLLIWLEGHLDQPLSLDNVAAKAGYSKWHLQRMFKDVTGHAIGAYIRARRLSKSAVALRLTARPILDIALQYRFDSQQTFTRAFKKQFAQTPALYRRSP----------
General information:
TITO was launched using:
RESULT:
Template:
1D5Y.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -56035 for 667 contacts (-84.0/contact) +
2D Compatibility (PS) -10716 + (NN) -2367 + (LL) 5160
1D Compatibility (HY) -5200 + (ID) 1350
Total energy: -70508.0 ( -105.71 by residue)
QMean score : 0.499
(partial model without unconserved sides chains):
PDB file :
Tito_1D5Y.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1D5Y-query.scw
PDB file :
Tito_Scwrl_1D5Y.pdb
: