Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
METNKPTLYWSLLMFKDWNFYIASTLKGLVFVGSQNKPIEELFEWARKRFPGSLLVEDDDKLEPYAVEITQYLEGKRK--NFTVPV-EY---AGTQFQLA-VWNALCEIPYGQTKSYSDIANDINKPAAVRAVGAAIGANPVLITVPCHRVIGKNGSLTGYRGGFEMKTLLLDLEKRASSEMDVPH
1EH6 Chain:A ((5-178))
-----CEMKRTTLDSPLGKLELSGCEQGLHEIKLLG----------EVPAPAA-VLGGPEPLMQCTAWLNAYFHQPEAIEEFPVPALHHPVFQQESFTRQVLWKLLKVVKFGEVISYQQLAALAGNPKAARAVGGAMRGNPVPILIPCHRVVCSSGAVGNYSGGLAVKEWLLAHEGHRLGK-----
General information:
TITO was launched using:
RESULT:
Template:
1EH6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -72380 for 1169 contacts (-61.9/contact) +
2D Compatibility (PS) -17091 + (NN) -5927 + (LL) 1800
1D Compatibility (HY) -7200 + (ID) 2000
Total energy: -102798.0 ( -87.94 by residue)
QMean score : 0.421
(partial model without unconserved sides chains):
PDB file :
Tito_1EH6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1EH6-query.scw
PDB file :
Tito_Scwrl_1EH6.pdb
: