Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLLFTAVISVPMLLLAVSVLMSVIYDSMFKPMNHGMPFHRSFAYPAMIVVFLISLLLLAFLFSKSIHSLLHKINLLNQTIRHLASDQRVPDKIEVKRADEIGELIKSVNLLIERTTYRELELRQQEEIKKELLQKLRHDINTPLTALRLQLFYLEDQCHG-----QAVFESLYQQIEYISELTNEFNLYSAETLESSYIVNEEVRLNELLETAVKKWDYLYSMSG-----IELHYKPADQDVIWMSNTLWMERLFDNIFQNTLRHSKAKK-MEVTIE----HGDVFIRDDGIGFDRN--------------ESSEGLGLKIIEDTCRLLAITYELHTNDN-GTGFLFSKE |
| 4U7O Chain:A ((32-261)) | -----------------------------------------------------------------------------------------------------------------------------DNDRKQFVSNVSHELRTPLTSLRSYIEALSDGAWKDPEVAPGFLKVTQEETDRMIRMINELLSLSRMDSGTTRVDMELVNINEMFNYVLDRFDMILKKDDNPAKYYTIKREFTKRDLWVEIDTDKFTQVLDNIMNNAIKYSPDGGVVTCRLLETHNQVIISISDQGLGIPRADLGHVFDRFFRVDKQGGTGLGLAISKEVVQMLGGRIWVDSVEGKGSTFYISLP |
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General information:
TITO was launched using:
| RESULT:
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Template: 4U7O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -79451 for 1287 contacts (-61.7/contact) +
2D Compatibility (PS) -21580 + (NN) -10468 + (LL) 12340
1D Compatibility (HY) -12800 + (ID) 1950
Total energy: -113909.0 ( -88.51 by residue)
QMean score : 0.573
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