Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -MVKKWLIQFAVMLSVLSTFTYSASAVGVTAITGNNSFDTAMPIGYWKYKNIDTTILEAGQDEAYFTFTANKGEKVYMRSTYQSAYTGMKIEIYDKNRIPVSQGT---EVINPNTFSSFIYANADAQNTT--DTFYVKVSRGTYTGNMYFTLSIEDRIKSGSG--TFQFSGVAENKGNTSLSPSGSDSSVIKVDLTNQS--GIPRDAIVTRVQTTATQTPSQGNTRHLIMTSENNEWSRALVNSSTSGSYDISLSDQL--SVA------KVW-----SFKYNTLATARSTMSN---VKAKIDYEYDVTKQF--- |
| 3P4G Chain:A ((23-323)) | HSFDHYIGSAFDASNNNVAVTGNVSAT-LNVLAGDDKVSIDGNVEDVLVAA-NVAVLDMGTGNDQLYVAGDVLGKIDAGTGND------EIYIKGDVSAAVDAGTGNDEVYIGGNLSGDLDAGTDNDNIQIGGDVNAALNAGTGNDNLIIGHDVSGIVNMGTDNDTVEVGRTINASGKVLLDT-GDDSLLVSGDLFGEVDGGTGNDTIIIAGKVSG---NIQGGTGNDIVRVQSQVWAEANISLGT-GDDVLIVEHELHGTVAGNEGDDSIYLKFYTKEQYNNNSDLRNRVANFEHIRVSDGVVKGSPADFADY |
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General information:
TITO was launched using:
| RESULT:
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Template: 3P4G.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -34790 for 2348 contacts (-14.8/contact) +
2D Compatibility (PS) -28326 + (NN) -2110 + (LL) 496
1D Compatibility (HY) -6400 + (ID) 2450
Total energy: -73580.0 ( -31.34 by residue)
QMean score : 0.144
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