Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRKNRILALFVLSLGLLSFMVTPVSAASKGNLLSPDRILTVAHRGASGYVPEHTILSYETAQKMKADFIELDLQMTKDGKLIVMHDEKLDRTTNGMGWVKDHTLADIKKLDAGSWFNEAYPEKAKPQYVGLKVPTLEEVLDRFG-KHANYYIETKSPDT-YPGMEEKLIASLQKHKLLGKHSKPGQVIIQSFSKESLVKVHQLQPNLPT-----VQLLEAKQMASMTDAALEEIKTYAVGAGPDYKALNQENVRMIRSHGLLLHPYTVNNEADMHRLLDWGVTGVFTNYPD-LFHKVKKGY
2PZ0 Chain:B ((11-251))------------------------------------KTLVIAHRGDSKNVPENTIAAFKRAMELGADGIELDVQLTKDGHLVVIHDETVDRTTNGEGFVKDFTLEEIKKLDAGIKFGE--------KFAGERIPTLYEVFELIGDKDFLVNIEIKSGIVLYPGIEEKLIKAIKEYNF------EERVIISSFNHYSLRDVKKMAPHLKIGLLYQCGLVEPWHMA---------LRMEAYSLHPFYFNIIPELVEGCKKNGVKLFPWTVDRKEDMERMIKAGVDGIITDDPETLINLVRKG-


General information:
TITO was launched using:
RESULT:

Template: 2PZ0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1294 -119948 -92.70 -514.80
target 2D structure prediction score : 0.73
Monomeric hydrophicity matching model chain B : 0.73

3D Compatibility (PKB) : -92.70
2D Compatibility (Sec. Struct. Predict.) : 0.73
1D Compatibility (Hydrophobicity) : 0.73
QMean score : 0.599

(partial model without unconserved sides chains):
PDB file : Tito_2PZ0.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2PZ0-query.scw
PDB file : Tito_Scwrl_2PZ0.pdb: