Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIHLSILDQAPVSKGESPVTTLQHSVELAQLSEQWGYKRYWFAEHHSTKG---LASTAPEIMIARIAAQTNTIRVGSGGVLLPQ-YSPFKVAETFRQLEALYPNRIDLGVGRSPGGTTKTRLALTD--GVKKSLTEFNRQLQDVSYFLTDS-LP-PDHPY---AGIKAAPLIGTAPELWVLGLGENSARRAAHQGIGYVFGHFINPER-GENAFRIYRESFRPSAHF-SNPSALFTIFVICAKTDEEAEELALSQDLWLLRVGKGLDSRVPSIEEAKAHPYTASDKKLIEENR-KRMVIGSPTTVKQQLLDLTGCYETNEIMVLCNVFDFEAKKESYERLAELFL
1RHC Chain:A ((2-325))KTQIGYFASLEQ-------YRPMDALEQAIRAEKVGFDSVWVDDHFHPWYHDNAQSAQAWAWMGAALQATKKVFISTCITCPIMRYNPAIVAQTFATLRQMYPGRVGVAVGAGEAM--NEVPVTGEWPSVPVRQDMTVEAVKVMRMLWESDKPVTFKGDYFTLDKAFLYTKPDDEVPLYFSGMGPKGAKLAGMYGDHLMTVA-AAPSTLKNVTIPKFEEGAREAGKDPSKMEHAMLIWYSVDPDYDKAVEALRFWAGCLVPSMF-KYKVYD-PKEVQLH--A-NL-VHCDTIKENYMCATDAEEMIKEIERFK-EAGINHFCLGNSSP---DVNFGIDIF-KEVI


General information:
TITO was launched using:
RESULT:

Template: 1RHC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1756 -165032 -93.98 -532.36
target 2D structure prediction score : 0.73
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : -93.98
2D Compatibility (Sec. Struct. Predict.) : 0.73
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.511

(partial model without unconserved sides chains):
PDB file : Tito_1RHC.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1RHC-query.scw
PDB file : Tito_Scwrl_1RHC.pdb: