Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSMQEKIMRELHVKPSIDPKQEIEDRVNFLKQYVKKTGAKGFVLGISGGQDSTLAGRLAQLAVESIREEGGDAQFI--AVRLPHGTQQDEDDAQLALKFIKPDKSWKFDIKSTVSAFSDQYQQETGDQLTDFNKGNVKARTRMIAQYAIGGQEGLLVLGTDHAAEAVTGFFTKYGDGGADLLPLTGLTKRQGRTLLKELGAPERLYLKEPTADLLDEKPQQSDETELGISYDEIDDYLEGKEVSAKVSEALEKRYSMTEHKRQVPASMFDDWWK
1XNG Chain:B ((13-211))--------------------------CDFLEKEVQKRGFKKVVYGLSGGLDSAVVGVLCQ----KVFKENAHALLMPSSVSMP---ENKTDALNLCEKFSIP--YTEYSIAPYDAIFSSHFKDAS---LT--RKGNFCARLRMAFLYDYSLKSDSLVIGTSNKSERMLGYGTLFGDLACAINPIGELFKTEVYELARRLNIPKKILNKPPSADLF---VGQSDEKDLGYPYSVIDPLLKDIE--------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1XNG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 980 -55531 -56.66 -281.88
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain B : 0.74

3D Compatibility (PKB) : -56.66
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.74
QMean score : 0.439

(partial model without unconserved sides chains):
PDB file : Tito_1XNG.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1XNG-query.scw
PDB file : Tito_Scwrl_1XNG.pdb: