Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence---------------------------------------------------------------MHVITTQVLFIFCFLLLIHSIETLAYATRLSGARVGFIASALSLFNVMVIVSRMSNMVQQPFTGHLIDDAGKNALAIVGEQFRFLI--FGSTVGTILGI-----ILLPSFVALFSRAIIHLAG-GGGSVFQVFRKGFSK------QGFKNALSYLRLP--------SISYVKGFHMRLIPKRLFVINMLITSIYTIGVLSALYAGLLAPERST--------TAVMASGLINGIATMLLAIFVDPKVSVLADDVAKGKRSYI--------------------YLKWTSVTMVTSRVAGTLLAQLMFIPGAYYIAWLTKWF--------------
4I6M Chain:B ((3-439))PFRQDSILIIYPRSQTTLVQFGLNEETFTVPELEIPTQIYRTTRQDGSYTYHSTNKDNKAELIKPIQNGEIIDISAFTQFLRLIFVSILSDRANKNQDAFEAELSNIPLLLITHHSWSQSDLEIITQYVFESLEINNLIQLPASLAATYSMISLQNCCIIDVGTHHTDIIPIVDYAQLDHLVSSIPMGGQSINDSLKKLLPQWDDDQIESLKKSPIFEVLSKNSDLEFNTFWDEKGNEIKVGKQRFQGCNNLIKNISNRVGLTLDNIDDINKAKAVWENIIIVGGTTSISGFKEALLGQLLKDHLIIEPEEEKSKREEEAKSFVPTIEYVQCPTVIKLAKYPDYFPEWKKSGYSEIIFLGAQIVSKQIFTHPKDTFYITREKYNMKGPAALWDVQF


General information:
TITO was launched using:
RESULT:

Template: 4I6M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 963 -169261 -175.76 -629.22
target 2D structure prediction score : 0.44
Monomeric hydrophicity matching model chain B : 0.60

3D Compatibility (PKB) : -175.76
2D Compatibility (Sec. Struct. Predict.) : 0.44
1D Compatibility (Hydrophobicity) : 0.60
QMean score : 0.046

(partial model without unconserved sides chains):
PDB file : Tito_4I6M.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4I6M-query.scw
PDB file : Tito_Scwrl_4I6M.pdb: