Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKIGIVGATGYGGTELVRILSHHPHAEECILYSSSGEGNVYSEGYPHLTGLADQQLKPIDM--NTIKHEIDIMFLAAPPGVSSELTPKLADAGITVIDLSGDLRIKEPAEYEKWYKRTAA-PKAVIQEAVYGLAELNQLQIQQAKLIANPGCFPTAVLLGLAPLAQK-KLLDESFVIVDAKTGVSGAGRKASMGTHFSELNDNFKIYKV-NEHQHTPEIEQALNEWQPGLGPITFSAHLVPMTRGIMATMYTRLTCDLTADDLHDLYSEFYQDSYFVRVRPKGQYPQTKEVYGSNFCDIAVTLDERTNRVTIVSVIDNLMKGAAGQAVQNFNLMNGWNEETGLTITPIYP
1XYG Chain:A ((17-359))IRIGLLGASGYTGAEIVRLLANHPHFQVTLMTADRKAGQSMESVFPHLRAQK---LPTLVSVKDADFSTVDAVFCCLPHGTTQEIIKELP-TALKIVDLSADFRLRNIAEYEEWYGQPHKAV-ELQKEVVYGLTEILREDIKKARLVANPGCYPTTIQLPLVPLLKANLI-KHENIIIDAKSGVSGAGRGAKEANLYSEIAEGISSYGVTR-HRHVPEIEQGLSDVAQSKVTVSFTPHLMPMIRGMQSTIYVEMAPGVRTEDLHQQLKTSYEDEEFVKVLDEGVVPRTHNVRGSNYCHMSVFPDRIPGRAIIISVIDNLVKGASGQALQNLNIMLGYPETTGLLHQPLFP


General information:
TITO was launched using:
RESULT:

Template: 1XYG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1988 -203526 -102.38 -602.15
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain A : 0.83

3D Compatibility (PKB) : -102.38
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.83
QMean score : 0.432

(partial model without unconserved sides chains):
PDB file : Tito_1XYG.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1XYG-query.scw
PDB file : Tito_Scwrl_1XYG.pdb: