Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMALFTAKVTARGGRAGHITSDDGVLDFDIVMPNAKKEGQTGTNPEQLFAAGYAACFGGALEHVAKEQNIEIDS-EIEGQVSLMKDESDGGFKIGVTLVVNTKDLDREKAQELVNAAHEFCPYSKATRGNVDVKLELK
3EER Chain:A ((11-143))-TIYQTSATASAGRNGVVSTEDKLLELNLSYPKEMGGSGTATNPEQLFAVGYAACFSNAILHVAREAKVALKEAPVTATVGIGPNGQ-GGFALSVALAAHI-ALEDEQARQLVTVAHQVCPYSNAVRGNIDVQVSV-


General information:
TITO was launched using:
RESULT:

Template: 3EER.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 492 -85192 -173.15 -645.39
target 2D structure prediction score : 0.79
Monomeric hydrophicity matching model chain A : 0.85

3D Compatibility (PKB) : -173.15
2D Compatibility (Sec. Struct. Predict.) : 0.79
1D Compatibility (Hydrophobicity) : 0.85
QMean score : 0.567

(partial model without unconserved sides chains):
PDB file : Tito_3EER.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3EER-query.scw
PDB file : Tito_Scwrl_3EER.pdb: