Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGIINGKEFIDRLNKLENEIWYDGEKIKGNISEHPAFKGIIKTKSSLYELQTKDELIHEMTYCLPGDHNRIGLSYLQPKTKNDLKKRRTMIEHWARHTHGMMGRSPDYMNTVMMSFASSAELLKDKENCFPEHILDMYEQAAKHDLSFTHTFITPQVNRSQSYFGLSEKPISAKVIDRTEKGLMIHGARLLATQGGLTDEILVFSAPKFFFETDEAYAFSIPSNTKGVKFITRESFVLSDSSFNHPLSSRYEEMDSIVVFDHVLVPWNRVFFYDNVEAAKDFMTKSSFHAFTFHQVVIRQMIKIEFLLGVAQLLVDT---I--NVSEYQHIQEKLSEIIVGLETIKALIDKSENDAQLDEFGYMRPCLIPLQVISTIIPKLYPRFTEIIQLIGASGMVT--LPTENAFDSEIREDLDQYLQATNTNAEERVKIFRLAWDLTMSSFGTRQTHYERYFFGDPIRISSRLYTSYPKQEQLNMIKTFLHADTEH
3SWO Chain:A ((124-370))----------------------------------------------------------------------------------------------------------------------------------EEQKNEWLPRLAAGDAIGCFGLTEPDFGSNPA-------GMRTRARR-DGSDWILNGTKMWITNGNLADVATVWAQTD-----DGIRGFLVPTDTPGFTANEIHR----------KLSLRA-SVTSELVLDNVRLPASAQLPL---AEGLSAPL--SCLNEARFGIVFGALGAARDSLETTIAYTQSREVFDKPLSNYQLTQEKLANMTVELGKGMLLAIHLGRIKDAE--G---VRPEQISLGKLNNVREAIAIARECRTLLGGSGITLEYSPLRHANNL-------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3SWO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1009 -78789 -78.09 -328.29
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain A : 0.61

3D Compatibility (PKB) : -78.09
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.61
QMean score : 0.440

(partial model without unconserved sides chains):
PDB file : Tito_3SWO.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3SWO-query.scw
PDB file : Tito_Scwrl_3SWO.pdb: