Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKSGKWFSLAAALSVTAIVGAGCSMSNGDAQKDTKTTAETKQTEQKTADSKKSNTQNSEFSLESQYFNDIKKVDGLETIQNPENILALVNKQYALPGNYEPSDLVIPDVEFSFEEKIQKRYIRKEAADALKTMFDAAKKEGYELAAVSGYRSYDRQKVIFDNEVSLKGERKAKEAVAYPGESEHQTGLAMDISSRSNGF--ELNEAFGSTADGKWVQDNAYKYGFIIRYPKNKEDITKYEYEPWHLRYVGKKAAKVIQDNDLTLEEYFEKVKKI
4MUR Chain:A ((22-205))-----------------------------------------------------------------------------------MNTLQLINKNHPLKKNQEPPHLVLAPF------SDHDVYLQPEVAKQWERLVRATG-LEKDIRLVSGYRTEKEQRRLWEYSLKENGLAYTKQFVALPGCSEHQIGLAIDVGLKKQEDDDLICPHFRDSAAADLFMQQMMNYGFILRYPEDKQEITGISYEPWHFRYVGLPHSQVITAQKWTLEEYHDYLAQ-


General information:
TITO was launched using:
RESULT:

Template: 4MUR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 902 -17063 -18.92 -93.75
target 2D structure prediction score : 0.55
Monomeric hydrophicity matching model chain A : 0.73

3D Compatibility (PKB) : -18.92
2D Compatibility (Sec. Struct. Predict.) : 0.55
1D Compatibility (Hydrophobicity) : 0.73
QMean score : 0.448

(partial model without unconserved sides chains):
PDB file : Tito_4MUR.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4MUR-query.scw
PDB file : Tito_Scwrl_4MUR.pdb: