Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNNIGEIISNFEGIIGALLGVIVTLILTHILKHFGQI-----KFYIVDFEIYFKTDNDGWGTNVMPSKDEAKQIEIHSQIEIYNGAEIPKVLREIKFCFYKNTNLIVSVTPDDKATTEEFAEFGYYRDKLFNINLPSKQIIAINIIKFLNEK-ETKQVKKCN----RVYLEAKDHNGKMYKVFLGEF
1Y13 Chain:A ((19-181))----------NSSAEVSVESPSFSFNCAHFIAYNGFRETLHGHNYNVSLKVRGYVRDDGYVIDFSILKEKVKKVCNKLDHHFILPIYSD-------VLKFENVKNNIKIICEDNSEYSFPERD----CIKLPIKHSSTEEIGQYILNQLIEEMDVSLLKSRHIHYIEISVSESPTQKAIVHKYI---


General information:
TITO was launched using:
RESULT:

Template: 1Y13.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 670 2921 4.36 19.09
target 2D structure prediction score : 0.45
Monomeric hydrophicity matching model chain A : 0.62

3D Compatibility (PKB) : 4.36
2D Compatibility (Sec. Struct. Predict.) : 0.45
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.319

(partial model without unconserved sides chains):
PDB file : Tito_1Y13.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1Y13-query.scw
PDB file : Tito_Scwrl_1Y13.pdb: