Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMFTGIIEETGTIESMKKAGHAMALTIKCS-KILEDVHLGDSIAVNGICLTVTDFTKNQFTVDVMPETVKATSLNDLTKGSKVNLERAMAANGRFGGHFVSGHVDGTAEITRIEEKSNAVYYDLKMDPSLTKTLVLKGSITVDGVSLTIFGLTEDTVTISLIPHTISETIFSEKTIGSKVNIECDMIGKYMYRFLHKANENKTQQTITKAFLSENGF
3DDY Chain:A ((1-183))MFRGIVQGRGVIRSISKSEDSQRHGIAFPEGMFQLVDVDTVMLVNGCSNTVVRILGDMVYFDI-DQALGTTTFDGLKEGDQVNLEIHP---------GLTGNIKGTALVAAIEENDAGFSVLIDIPKGLAENLTVKDDIGIDGISLPITDMSDSIITLNYSRDLLASTNIASLAKDVKVNVEIL--------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3DDY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 957 -23595 -24.65 -136.38
target 2D structure prediction score : 0.53
Monomeric hydrophicity matching model chain A : 0.74

3D Compatibility (PKB) : -24.65
2D Compatibility (Sec. Struct. Predict.) : 0.53
1D Compatibility (Hydrophobicity) : 0.74
QMean score : 0.471

(partial model without unconserved sides chains):
PDB file : Tito_3DDY.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3DDY-query.scw
PDB file : Tito_Scwrl_3DDY.pdb: