Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKIGIFGGTFDPPHNGHLLMANEVLYQAGLDEIWFMPNQIPPHKQNEDYTDSFHRVEMLKLAIQSNPSFKLELVEMEREGPSYTFDTVSLLKQRYPNDQLFFIIGADMIEYLPKWYKLDELLNLIQFIGVKRPGFHVETPYPLLFADVPEFEVSSTMIRERFKSKKPTDYLIPDKVKKYVEENGLYES
3MMX Chain:C ((3-190))MRKIGIIGGTFDPPHYGHLLIANEVYHALNLEEVWFLPNQI--------ITSVESRLQMLELATEAEEHFSICLEELSRKGPSYTYDTMLQLTKKYPDVQFHFIIGGDMVEYLPKWYNIEALLDLVTFVGVARPGYKLRTPYPITTVEIPEFAVSSSLLRERYKEKKTCKYLLPEKVQVYIERNGLYE-


General information:
TITO was launched using:
RESULT:

Template: 3MMX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 860 -146351 -170.18 -813.06
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain C : 0.89

3D Compatibility (PKB) : -170.18
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.89
QMean score : 0.662

(partial model without unconserved sides chains):
PDB file : Tito_3MMX.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3MMX-query.scw
PDB file : Tito_Scwrl_3MMX.pdb: