Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGKNPVVIGIAGGSGSGKTSVTRSIYE----QFKGHSILMIQQDLYYKDQSHLPFEERLNT-----NYDHPLAFDNDYLIEHIQDLLNYRPIEKPIYDYKLHTRSEETVHVEPKDVIILEGILVLEDKRLRDLMDIKLYVDTDADLRIIRRIMRDINERGRSIDSVIEQYVSVVRPMHNQFVEPTKRYADIIIPEGGQNHVAIDLMVTKIQTILEQNAIL
1UEJ Chain:A ((21-231))---EPFLIGVSGGTASGKSSVCAKIVQLLGQ---QKQVVILSQDSFYR---VLTSEQKAKALKGQFNFDHPDAFDNELILKTLKEITEGKTVQIPVYDFVSHSRKEETVTVYPADVVLFEGILAFYSQEVRDLFQMKLFVDTDADTRLSRRVLRDISERGRDLEQILSQYITFVKPAFEEFCLPTKKYADVIIPRGADNLVAINLIVQHIQDIL------


General information:
TITO was launched using:
RESULT:

Template: 1UEJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 951 17903 18.83 91.34
target 2D structure prediction score : 0.70
Monomeric hydrophicity matching model chain A : 0.85

3D Compatibility (PKB) : 18.83
2D Compatibility (Sec. Struct. Predict.) : 0.70
1D Compatibility (Hydrophobicity) : 0.85
QMean score : 0.463

(partial model without unconserved sides chains):
PDB file : Tito_1UEJ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1UEJ-query.scw
PDB file : Tito_Scwrl_1UEJ.pdb: