Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNQLIQAQKKLLPDLLLVMQKRFEILQYIRLTEPIGRRSLSASLGISERVLRGEVQFLKEQNLVDIKTNGMTLTEEGYELLSVLEDTMKDVLGLTLLEKTLKERLNLKDAIIVSGDSDQSPWVKKEMGRAAVACMKKRFSGKNIVAVTGGTTIEAVAEMMTPDSKNRELLFVPARGGLGE-DVKNQANTICAHMAEKA-SGTYRLLFVPGQLSQG-AYSSIIEEPSVKEVLNTIKSASMLVHGIGEAKT-MA---QRRNTPLED-LKKIDDNDAVTEAFGYYFNADGEVVHK----VHSVGMQLDDIDAIPDIIAVAGGSSKAEAIEAYFKKPR-NTVLVTDEGAAKKLLRDE
4L5J Chain:A ((17-317))-------------------EEQVARIAWFYYHDGLTQSEISDRLGLTRLKVSRLLEKGHQSGIIRVQINS----------------RF---EGCLEYETQLRRQFSLQHVRVIPGLAD--ADVGGRLGIGAAHMLMSLLQPQQMLAIGFGEATMNTLQRLSGFISSQQIRLVTLSGGVGSYMTGI---------GQLNAACSVNIIPAPLRASSADIARTLKNENCVKDVLLAAQAADVAIVGIGAVSQQDDATIIRSGYISQGEQLMIGRKGAVGDILGYFFDAKGDVVTNIKIHNELIGLPLSALKTIPVRVGVAGGENKAEAIAAAMKGGYIN-ALVTDQDTAAAILR--


General information:
TITO was launched using:
RESULT:

Template: 4L5J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1425 -78122 -54.82 -271.26
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain A : 0.70

3D Compatibility (PKB) : -54.82
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.70
QMean score : 0.476

(partial model without unconserved sides chains):
PDB file : Tito_4L5J.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4L5J-query.scw
PDB file : Tito_Scwrl_4L5J.pdb: