Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGESTSLKEILSTLTKRILLIMIVTAAATAAGGLISFFALTPIYENSTQILVNQSKNERKEVQFNDVQTNLQLINTYNVIIKSPAILDEVIKEMGLSMTSQELNDKITVSSEQDSQVVNISVRDENAETAAHIANTIASVFQDKITSIMNVDNVSILSKAEVSEHPSPVSPKPLLNIAIAFAAGLAGSIGLAFLLEHLDNTIKSEEQLESLLDIPVLGTVSTIANEQKTAKTLQGFQSEKTGSGHFGA
2PL9 Chain:D ((1-19))------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGVVASQDQVDDLLDSLGF-------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2PL9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 12 -2395 -199.54 -126.03
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain D : 0.51

3D Compatibility (PKB) : -199.54
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.51
QMean score : 0.614

(partial model without unconserved sides chains):
PDB file : Tito_2PL9.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2PL9-query.scw
PDB file : Tito_Scwrl_2PL9.pdb: