Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDREKQQLSIEAARLYYQSDYSQQQIAEQLNISRPTVSRLLQYAKEKGYVQIRVMDPFEDLDALGSILEEKYGLLEAHVVFSPTPD-YAGITHDLSRYGAEYMHETVKDGDIVGVSWGTTMYQIAQNMQPKQVKGVEVVQLKGGISH-SRVNTYSAETIQLFAEAFQTMPRYLPLPVVFDNADVKRMVEKDRHIERIIEMGKQANIALFTVGTVRDEALLFRLGYFNEEE-KALLKKQAVGDICSRFFDAKGNICSSAINDRTIGVELQDLRLKERSILVAGGSRKVSSIHGALTGKYANVLIIDQHTARALVNDL
3NZE Chain:A ((9-263))------------------------------------------------------------GPELESQIRNQYGV-DVHVVPVLDTLNEAETLDRVAMQAARTIGPLVDSNAIIGVAWGATLSAVSRHLTRKMTHDSIVVQLNGAGNMQTTGITYASDIMRRFGSAYGARVEQFPVPAFFDHASTKTAMWNERSVQRILDLQARMSIAIFGVGSVD---HVYAGGYLDEHDLTMLAADDVVGDVATVFFRSDGSSDGITLNERSTGPSHEQLRQVRRRICVVSGASKINGLQGALAAGLATDLILDEASARRLVS--


General information:
TITO was launched using:
RESULT:

Template: 3NZE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1415 -31403 -22.19 -127.14
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain A : 0.74

3D Compatibility (PKB) : -22.19
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.74
QMean score : 0.531

(partial model without unconserved sides chains):
PDB file : Tito_3NZE.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3NZE-query.scw
PDB file : Tito_Scwrl_3NZE.pdb: