Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MGNMPKDFLWGGALAAHQFEGGWNQGGKGPSVVDVMTAGAHGVPRKITDTIEENEFYPNHEAIDFYHRYKEDIALFAEMGLKCLRTSIGWSRIFPKGDEAEPNEAGLQFYDDVFDELLKHGIEPVITLSHFEMPLHLAREYGGFRNRKVVDFFVNFAEACFTRYKDKVKYWMTFNEINNQMDVNNPLFLWTNSGVVVGENENAKE--VMYQTAHHELVASALAVAKGKDINPEFQIGAMVSHVPIYPFSSNPEDVMLAE--EEMRQRYFFPDVQVRGYYPSYALKEFEREGYNITFEDGDDEILRNGTVDYLGFSYYMSTTVKSDVKNDNTGDIVNGGLPNGVENPYITSSDWGWAIDPTGLRYTLNRFYDRY-QIPLFIVENGFGAVDTLEEDGKVHDPERIQYLKSHIEALKKAVTYDGVDLIGYTPWGIIDIVSFTTGEMKKRYGMIYVDRDNEGNGSMKRYKKDSFEWYKNVIQTNGEEL 4PTV Chain:B ((7-445)) ---FPEDFIWGAATSSYQIEGAFNEDGKGESIWDRFSHTPGKIENGDTGDI----------ACDHYHLYREDIELMKEIGIRSYRFSTSWPRILPEG-KGRVNQKGLDFYKRLVDNLLKANIRPMITLYHWDLPQAL-QDKGGWTNRDTAKYFAEYARLMFEEFNGLVDLWVTHNE---------PWVVAFEGHAFGNHAPGTKDFKTALQVAHHLLLSHGMAVDIFREEDLPGEIGITLNLTPAYPAGDSEKDVKAASLLDDYINAWFLSPV-FKGSYPEELHHIYEQNLGAFTTQPGDMDIISR-DIDFLGINYYSRMVVRHK-PGDN---LFNAEVVKMEDRP---STEMGWEIYPQGLYDILVRVNKEYTDKPLYITENGAAFDDKLTEEGKIHDEKRINYLGDHFKQAYKALK-DGVPLRGYYVWSLMDNFEWAYG-YSKRFGLIYVDYEN-GN---RRFLKDSALWYREVIE------

General information: TITO was launched using: RESULT: Template: 4PTV.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 2534 -74494 -29.40 -171.65 target 2D structure prediction score : 0.60 Monomeric hydrophicity matching model chain B : 0.78 3D Compatibility (PKB) : -29.40 2D Compatibility (Sec. Struct. Predict.) : 0.60 1D Compatibility (Hydrophobicity) : 0.78 QMean score : 0.595

(partial model without unconserved sides chains): PDB file : Tito_4PTV.pdb: (Unconserved sides chains are recalculated) : Sequence: align-4PTV-query.scw PDB file : Tito_Scwrl_4PTV.pdb: