Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRILVVDNYDSFVFNLVQYLGQLGIEAEVWRNDDHRLSDEAAVAGQFDGVLLSPGPGTPERAG---ASVSIVHACAAAHTPLLGVCLGHQAIGVAFGATVDRAPELLHGKTSSVFHT---NVGVLQGLPDPFTATRYHSLTILPKSLPAVLRVTART-SSGVIMAVQHTGLPIHGVQFHPESILTEGGHRILANWLTCCGWTQDDTLVRRLENEVLTAISPHFPTSTASAGEATGRTSA
1QDL Chain:B ((2-195))
DLTLIIDNYDSFVYNIAQIVGELGSYPIVIRNDEISIKGI--ERIDPDRLIISPGPGTPEKREDIGVSLDVIKY-LGKRTPILGVCLGHQAIGYAFGAKIRRARKVFHGKISNIILVNNSPLSLYYGIAKEFKATRYHSLVVD--EVHRPLIVDAISAEDNEIMAIHHEEYPIYGVQFHPESVGTSLGYKILYNFLNRV----------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1QDL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -146372 for 1653 contacts (-88.5/contact) +
2D Compatibility (PS) -19838 + (NN) -3909 + (LL) 2392
1D Compatibility (HY) -18400 + (ID) 4100
Total energy: -190227.0 ( -115.08 by residue)
QMean score : 0.554
(partial model without unconserved sides chains):
PDB file :
Tito_1QDL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1QDL-query.scw
PDB file :
Tito_Scwrl_1QDL.pdb
: