Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MVILLPMVTFTMAYLIVDVPKPGDIRTNQVSTILASDGSEIAKIVPPEGNRVDVNLSQVPMHVRQAVIAAEDRNFYSNPGFSFTGFARAVKNNLFGGDLQGGSTITQQYVKNALVGSAQHGWSGLMRKAKELVIATKMSGEWSKDDVLQAYLNIIYFGRGAYGISAASKAYFDKPVEQLTVAEGALLAALIRRPSTLDPAVDPEGAHARWNWVLDGMVETKALSPNDRAAQVFPETVPPDLARAENQTKGPNGLIERQVTRELLELFNIDEQTLNTQGLVVTTTIDPQAQRAAEKAVAKYLDGQDPDMRAAVVSIDPHNGAVRAYYGGDNAN-------------------GFDFA-QAGLQTGSSFKVFALVAALEQG-IGLGYQVDS-SPLTVDGIKITNVEGEGCGTCNIAEALKMSLNTSYYRLMLKLNGGPQAVADAAHQAGIASSFP--GVA-HTL-SEDGK---G--GPPNNGIVL-------------GQYQTRVIDMASAYATLAASGIYHPPHFVQKVVSANGQVLFDASTADNTGDQRIPKAVADNVTAAMEPIAGYSRGHNL-AGGRDSAAKTGTTQFGDTTANKDAWMVGYTP----SLSTAVWVGTVKGDEPLVTASGAAIYGSGLPSDIWKATMDGALKGTSNETFPKPTEVGGYAGVPPPPPPPEVPPSETVIQPTVEIAPGITIPIGPPTTITLAPPPPAPPAATPTPPP |
4MNR Chain:A ((85-435)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTAGNDVTLTLNSKIQQAAQDALAG--------RKGACVVMDPDTGAILAMASAPTYNAADFAAVIEQANANPDDSTLVDRAAGSLYAPGSTFKIVTLATALEDDVAGEDTVFSSPGTMEIGNATVSNFNKANYGSLTLAQATELSSNTVFGQLGVE--MGADKLVAGAESFGFNKEIDFPLYTPESLMPSAEDLQKSPWELAWAAAGEPVGDTTRPGRESPAGPQATVLEMAMVGTAIANDGVIMQPYLVDSVNNANGERSFSAS--PTKLMQAVSKTTAGRVRDVLLGVVQNGTGTAAAIPGIDVAGKTGTAEKE---NGNDSWFVGMAPAEDPRVVVAIVIEDGE--------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4MNR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -111168 for 2483 contacts (-44.8/contact) +
2D Compatibility (PS) -31369 + (NN) -14648 + (LL) 19228
1D Compatibility (HY) -10800 + (ID) 3750
Total energy: -152507.0 ( -61.42 by residue)
QMean score : 0.463
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