Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPSFDVVFVGHRRGEVRSDNAMLGLLCDAAFDEL--TRPDVVIFPGGIGTRTLIHDQTVLDWVREAHRHTLLTTSVCTGGLVLAAAGLLNGLTATTHWRVQDLFNSLGARYVPQRVVEHLPERVITAAGVSSGIDMGLRLVELLVSREAAEASQLMIEYDPQPPVDAGSLAKASPATHRLALEFYQHRL
3L18 Chain:A ((26-165))
-EGHEVYVASFQRGKITGK-HGYSVNVDLTFEEVDPDEFDALVLPGGKAPEIVRLNEKAVMITRRMFEDDKPVASICHGPQILISAKVLKGRRGTSTITIRDDVINAGAEWIDAEVVV--DGNWVSSRHPGDLYAWMREFVKLL---------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3L18.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -107211 for 1083 contacts (-99.0/contact) +
2D Compatibility (PS) -15070 + (NN) -6858 + (LL) 3776
1D Compatibility (HY) -7600 + (ID) 1350
Total energy: -134313.0 ( -124.02 by residue)
QMean score : 0.475
(partial model without unconserved sides chains):
PDB file :
Tito_3L18.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3L18-query.scw
PDB file :
Tito_Scwrl_3L18.pdb
: