Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRTPVILVAGQDHT--DEVTGALLR-R----TGTVVVEHRFDG-HVVRRMTATLSRGELITTEDALEFAHGCVSCTIRDDLLVL----LRRLHRRDNVGRIVVHLAPWLEPQ---PICWAIDHVRVCVGHGYPDGPAALDVRVAAVVTCVDCVRWLPQSLGEDELPDGRTVAQVTVGQAEFADLLVLTHPEPVAVAVLRRLAPRARITGGVDRVELALAHLDDNSRRGRTDTPHTPLLAGLPPLAADGEVAIVEFSARRPFHPQRLHAAVDLLLDGVVRTRGRLWLANRPDQVMWLESAGGGLRVASAGKWLAAMAASEVAYVDLERRLFADLMWVYPFGDRHTAMTVLVCGADPTDIVNALNAALLSDDEMASPQRWQSYVDPFGDWHDDPCHEMPDAAGEFSAHRNSGESR |
| 1J8M Chain:F ((98-250)) | --PYVIMLVGVQGTGKTTTAGKLAYFYKKKGFKVGLVGADVYRPAALEQL-QQL----------GQQIGVPVYGEPGEKDVVGIAKRGVEKFL-SEKMEIIIVDTAGRHGYGEEAALLEEMKN-------------IYEAIKPDEVTLVIDASIGQKAYD----------LASKFNQ-ASKIGTIIITKMD------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1J8M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -119780 for 1080 contacts (-110.9/contact) +
2D Compatibility (PS) -15509 + (NN) -9211 + (LL) 15096
1D Compatibility (HY) -4000 + (ID) 850
Total energy: -134254.0 ( -124.31 by residue)
QMean score : 0.291
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