Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTSNQKAILAGGCFWGLQDLIRNQPGVVSTRVGYSGGNIPNATYRN--HGTHAEAVEIIFDPTVTDYRTLLEFFFQIHDPTTKDRQGNDRGTSYRSAIFYFDEQQKRIALDTIADVEASGLWPGKVVTEVSPAGDFWEAEPEHQDYLQRYPNGYTCHF-VRPGW------RLPRRTAESALRASLSPELGT
3E0M Chain:A ((2-183))
---MAEIYLAGGCFWGLEEYFSRISGVLETSVGYANGQVETTNYQLLKETDHAETVQVIYDEKEVSLREILLYYFRVIDPLSINQQGNDRGRQYRTGIYYQDEADLPAIYTVVQEQER--MLGRKIAVEVEQLRHYILAEDYHQDYLRKNPSG-YCHIDVTDADKPLIDAANYEKPSQEVLKASLSEE---
General information:
TITO was launched using:
RESULT:
Template:
3E0M.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -64382 for 1277 contacts (-50.4/contact) +
2D Compatibility (PS) -19270 + (NN) -18004 + (LL) 180
1D Compatibility (HY) -14400 + (ID) 3100
Total energy: -118976.0 ( -93.17 by residue)
QMean score : 0.659
(partial model without unconserved sides chains):
PDB file :
Tito_3E0M.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3E0M-query.scw
PDB file :
Tito_Scwrl_3E0M.pdb
: