Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNAPKLVIGANGFLGSHVTRQLVADCAPQKGEVRAMVR-PAANTRSIDDLPLTRFHGDVFDTATVAEAMAGCDDVYYCVVDTRAWL---RDPSPLFRTNVAGLRNVLDVATDASLRRFVFTSSYATVGRRRG-----HVATEEDRVDTRKVTPYVRSRVAAEDLVLQYAHDAGLPAVAMCVSTTYGGGDWGR----TPHGAFIAGAVFG--RLPFTM--RGIRLEAVGVDDAARALILAAERGRNGERYLISER-MMPLQEVVRIAADEAGVPPPRWSISVPVLYALGALGSLRARLTGKDTELSLASVRMMRSEADVDHGKAVRELGWQPR-PVEESIREAARFWAAMRTVGKDPAAS |
| 2C5A Chain:A ((28-346)) | ENLKISITGAGGFIASHIARRLKH----EGHYVIASDWKKNE-HMTEDMFCDEFHLVDLRVMENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRS-FTFIDECVEGVLRLTKSD-FREPVNIGSDEMVSMNEMAEMVLSFEEKKLPIHHIPGP-------------------E---------GVRGRNSDNNLIKEKLGWAPNMRLKEGLRITYFWIKEQIEKEK----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2C5A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -172571 for 2655 contacts (-65.0/contact) +
2D Compatibility (PS) -32344 + (NN) -9320 + (LL) 2488
1D Compatibility (HY) -3600 + (ID) 2800
Total energy: -218147.0 ( -82.16 by residue)
QMean score : 0.484
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