Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSNRIVLEPSADHPITIEPTNRRVQVRVNGEVVADTAAALCLQEASYPAVQYIPLADVVQDRLIRTETSTYCPFKGEASYYSVTTDAGD---IVDDVMWTYENPYPAVAAIAGHVACYPDKAEISIFPG
4A94 Chain:C ((3-53))
---------------------------------------------------------VPDDR--PCINPGRCPLVPDATCTFVCKAADNDFGYECQHVWTFEG---------QRVGCYA----------
General information:
TITO was launched using:
RESULT:
Template:
4A94.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -9768 for 259 contacts (-37.7/contact) +
2D Compatibility (PS) -5144 + (NN) -3131 + (LL) 6016
1D Compatibility (HY) -2800 + (ID) 700
Total energy: -15527.0 ( -59.95 by residue)
QMean score : 0.371
(partial model without unconserved sides chains):
PDB file :
Tito_4A94.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4A94-query.scw
PDB file :
Tito_Scwrl_4A94.pdb
: