Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTPFDDPQAELAWMFLQSLCEGGDLDEGFALLSNDFTYWSIVTRTELDKKTFRRAVERRKQVFEVNIELIRCV--NEGETVVVEGHCDGVSA---------DRTRYDSPFVCIFETRDGMIISLREYSDTQSLAEVYPVACATPGRC
3F8H Chain:A ((14-149))
-NLYFQGMNDTIARYFDAFNA-GDTDGMLACLSEDVAHHVNEGNIRVGKEKFAAFCAHMSHCYKEELTDMVIFATPDATRAAAEYTVNGTYLATDEGLPEARQQSYKLPAGSFFDLRDGLITRVTTYYNLSDWIKQVS---------
General information:
TITO was launched using:
RESULT:
Template:
3F8H.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -59522 for 810 contacts (-73.5/contact) +
2D Compatibility (PS) -13587 + (NN) -4788 + (LL) 468
1D Compatibility (HY) -2800 + (ID) 950
Total energy: -81179.0 ( -100.22 by residue)
QMean score : 0.528
(partial model without unconserved sides chains):
PDB file :
Tito_3F8H.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3F8H-query.scw
PDB file :
Tito_Scwrl_3F8H.pdb
: