Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKACVVKELSGPSGMVYTDIDEVSGDGGKVVIDVRAAGVCFPDLLLTKGEYQLKLTPPFVPGMETAGVVRSAPSD-A----GFHVGERVSAFGVLGGYAEQIAVPVANVVRSPVELDDAGAVSLLVNYNTMYFALARRAALRPGDTVLVLGAAGGVGTAAVQIAKAMQAGKVIAMVHREGAIDYVASLGADVVLPLTE---GWAQQVRDHTYGQGVDIVVDPIGGPTFDDALGVLAIDGKLLLIGFAAGAVPTLKVNRLLVRNIS-VVGVGWGEYLNAVPGS-AALFAWGLNQLVFLG-LRPPPPQRYPLSEAQAALQSLDDGGVLGKVVLEP |
| 4RVU Chain:A ((5-332)) | MHAIEVTETGGPGVLRHVDQPQPQPGHGELLIKAEAIGVNFIDTYFRSGQYP--RELPFVIGSEVCGTVEAVGPGVTAADTAISVGDRVVSASANGAYAEFCTAPASLTAKVPDDVTSEVAASALLKGLTAHYLLKSVYPVKRGDTVLVHAGAGGVGLILTQWATHLGVR-VITTVSTAEKAKLSKDAGADVVLDYPEDAWQFAGRVRELTGGTGVQAVYDGVGATTFDASLASLAVRGTLALFGAASGPVPPVDPQRLNAAGSVYLTRPSLFHFTR-TGEEFSWRAAELFD-AINSEAITVAVGGRYPLADALRAHQDLEARKTVGSVVLLP |
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General information:
TITO was launched using:
| RESULT:
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Template: 4RVU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -270394 for 2859 contacts (-94.6/contact) +
2D Compatibility (PS) -34021 + (NN) -14640 + (LL) 568
1D Compatibility (HY) -6800 + (ID) 5050
Total energy: -330337.0 ( -115.54 by residue)
QMean score : 0.485
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