Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTDQRWLIDKSALVRL---TDSPDMEIWSNRIERGLVHITGVTRLEVGFSAEC-GEIARREFREPPLSAMPVEYLTPRI---EDRALEVQTLLADRGHHRGPSI--PDLLIAATAELSGLTVL-HVDKDFDAIAALTGQKTERLTHRPPSA
2H1C Chain:A ((1-139))
----MILLDTNVISEPLRPQPNERVVAWLDSLILEDVYLSAITVAELRLGVALLLNGKKKNVLHERLEQSILPLFAGRILPFDEPVAAIYAQIRSYAKTHGKEIAAADGYIAATAKQHSLTVATRDTGSFFAADVAVFNPWHL--------
General information:
TITO was launched using:
RESULT:
Template:
2H1C.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -39628 for 895 contacts (-44.3/contact) +
2D Compatibility (PS) -13454 + (NN) -372 + (LL) 512
1D Compatibility (HY) -4800 + (ID) 1100
Total energy: -58842.0 ( -65.75 by residue)
QMean score : 0.284
(partial model without unconserved sides chains):
PDB file :
Tito_2H1C.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2H1C-query.scw
PDB file :
Tito_Scwrl_2H1C.pdb
: