Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MANTGSLVLLRHGESDWNALNLFTGWVDVGLTDKGQAEAVRSGELIAEHDLLPDVLYTSLLRRAITTAHLALDSADRLWIPVRRSWRLNERHYGALQGLDKAETKARYGEEQFMAWRRSYDTPPPPIERGSQFSQDADPRYADIGGG--PLTECLADVVARFLPYFTDVIVGDLRVGKTVLIVAHGNSLRALVKHLDQMSDDEIVGLNIPTGIPLRYDLDSAMRPLVRGGTYLDPEAAAAGAAAVAGQGRG
3GW8 Chain:B ((11-231))
-----KLVLIRHGESTWNKENRFTGWVDVDLTEQGNREARQAGQLLKEAGYTFDIAYTSVLKRAIRTLWHVQDQMDLMYVPVVHSWRLNERHYGALSGLNKAETAAKYGDEQVLVWRRSYDTPPPALEPGDERAPYADPRYAKVPREQLPLTECLKDTVARVLPLWNESIAPAVKAGKQVLIAAHGNSLRALIKYLDGISDADIVGLNIPNGVPLVYELDESLTPI-------------------------
General information:
TITO was launched using:
RESULT:
Template:
3GW8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -98160 for 1787 contacts (-54.9/contact) +
2D Compatibility (PS) -23991 + (NN) -16908 + (LL) 1184
1D Compatibility (HY) -20000 + (ID) 6300
Total energy: -164175.0 ( -91.87 by residue)
QMean score : 0.387
(partial model without unconserved sides chains):
PDB file :
Tito_3GW8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3GW8-query.scw
PDB file :
Tito_Scwrl_3GW8.pdb
: