Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIRIGT--RGSLLATTQAATVRDALIAGGHSAELVTISTEGDRSMAPIASLGVGVFTT---ALREAMEAGLVDAAVHSYKDLPTAADPRFTVAAIPPRNDPRDAVVARDGLTLGELPV-GSLVGTSSPRRAAQ-LRALGLGLEIRPLRGNLDTRLNKVSSGDLDAIVVARAGLARLGRLDDVTETLEPVQMLPAPAQGALAVECRAGDSRLVAVLAELDDADTRAAVTAERALLADLEAGCSAPVGAIAEVVESIDEDGRVFEELSLRGCVAALDGSDVIRASGIGSCGRARELGLSVAAELFELGARELMW----GVRH |
| 1NH8 Chain:A ((21-304)) | MLRVAVPNKGAL-----SEPATEILAEAG-----YRRRTDSKDLTVIDPVNNVEFFFLRPKDIAIYVGSGELDFGITG-RDLVCDSGAQVRERLALGFGSSSFRYAAPAGRNWTTADLAGMRIATAYPNLVRKDLATKGIEATVIRLDGAVE-ISVQLGVADAIADVVGSGRTLSQHDLVAFGEPLCDSE--------AVLIERAEARDQLVARVQGVVFGQQYLMLDYDCP-RSALKKATAITPGLESPTIAPLADPDWVAIRALVP-----------------------RRDVNGIMDELAAIGAKAILASDIRFCRF |
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General information:
TITO was launched using:
| RESULT:
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Template: 1NH8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -60484 for 2067 contacts (-29.3/contact) +
2D Compatibility (PS) -28867 + (NN) -6601 + (LL) 2404
1D Compatibility (HY) -5600 + (ID) 2150
Total energy: -101298.0 ( -49.01 by residue)
QMean score : 0.302
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