Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNRIVQFGVSAVAAAAIGIGAGSGIAAAFDGEDEVTGPDADRARAAAVQAVPGGTAGEVETETGEGAAAYGVLVTRPDGTRVEVHLDRDFRVLDTEPADGDGG
2KGY Chain:A ((31-102))
-------------------------------EDEVTGPDADRARAAAVQAVPGGTAGEVETETGEGAAAYGVLVTRPDGTRVEVHLDRDFRVLDTEPADGDGG
General information:
TITO was launched using:
RESULT:
Template:
2KGY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 29156 for 546 contacts (53.4/contact) +
2D Compatibility (PS) -8137 + (NN) -7066 + (LL) 2136
1D Compatibility (HY) -5600 + (ID) 3600
Total energy: 6889.0 ( 12.62 by residue)
QMean score : 0.370
(partial model without unconserved sides chains):
PDB file :
Tito_2KGY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2KGY-query.scw
PDB file :
Tito_Scwrl_2KGY.pdb
: