Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRVLLLGPPGAGKGTQAVKLAEKLGIPQISTGELFRRNIEEGTKLGVEAKRYLDAGDLVPSDLTNELVDDRLNNPDAANGFILDGYPRSVEQAKALHEMLERRGTDIDAVLEFRVSEEVLLERLKGRG-------------------------------RADDTDDVILNRMKVYRDETAPLLEYYRDQ--LKTVDAVGTMDEVFARALRALGK
3FB4 Chain:A ((1-206))
MNIVLMGLPGAGKGTQAEQIIEKYEIPHISTGDMFRAAIKNGTELGLKAKSFMDQGNLVPDEVTIGIVHERLSKDDCQKGFLLDGFPRTVAQADALDSLLTDLGKKLDYVLNIKVEQEELMKRLTGRWICKTCGATYHTIFNPPAVEGICDKDGGELYQRIDDKPETVKNRLDVNMKQTQPLLDFYSQKGVLKDIDGQQDIKKVFV--------
General information:
TITO was launched using:
RESULT:
Template:
3FB4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -57957 for 1293 contacts (-44.8/contact) +
2D Compatibility (PS) -19255 + (NN) -13831 + (LL) 732
1D Compatibility (HY) -17600 + (ID) 3950
Total energy: -111861.0 ( -86.51 by residue)
QMean score : 0.643
(partial model without unconserved sides chains):
PDB file :
Tito_3FB4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3FB4-query.scw
PDB file :
Tito_Scwrl_3FB4.pdb
: