Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTYTIAEPCVDIKDKACIEECPVDCIYEGARMLYIHPDECVDCGACEPVCPVEAIFYEDDVPEQWSHYTQINADFFAELGSPGGAAKVGMTENDPQAVKDLAPQSEDA
2FD2 Chain:A ((1-74))
-AFVVTDNCIKCKYTDCVEVCPVDAFYEGPNFLVIHPDECIDCALCEPECPAQAIFSEDEVPEDMQEFIQLNAEL---------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2FD2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -65700 for 531 contacts (-123.7/contact) +
2D Compatibility (PS) -7621 + (NN) -6422 + (LL) 1408
1D Compatibility (HY) -9200 + (ID) 1800
Total energy: -89335.0 ( -168.24 by residue)
QMean score : 0.521
(partial model without unconserved sides chains):
PDB file :
Tito_2FD2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FD2-query.scw
PDB file :
Tito_Scwrl_2FD2.pdb
: