Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMRSTPPASAGRSTPPALAGHSTPPALAGHSTLCGRPVAGDRALIMAIVNRTPDSFYDKGATFS-DAAARDAVHRAVADGADVIDVGGVKAGPGERVDVDTEITRLVPFIEWLRGAYPDQLISVDTWRAQVAKAACAAGADLINDTWGG-VDPAMPEVAAEFGAGLVCAHTGGALPRTRPFRVSYGTTTRGVVDAVISQVTAAAERAVAAGVAREKVLIDPAHDFGKNTFHGLLLLRHVADLVMTGWPVLMALSNKDVVGETLGVDLTERLEGTLAATALAAAAGARMFRVHEVAATRRVLEMVASIQGVRPPTRTVRGLA
4D8A Chain:B ((37-293))--------------------------------------NEKTLIMGILN----------SYNEVDAAVRHA-KEMRDEGAHIIDIG----------SVEEEIKRVVPMIQAVSKEVK-LPISIDTYKAEVAKQAIEAGAHIINDIWGAKAEPKIAEVAAHYDVPIILMHNRDNM------------NYRNLMADMIADLYDSIKIAKDAGVRDENIILDPGIGFAKTPEQNLEAMRNLEQLNVLGYPVLLGTSRKSFIGHVLDLPVEERLEGTGATVCLGIEKGCEFVRVHDVKEMSRMAKMMDAMIG------------


General information:
TITO was launched using:
RESULT:

Template: 4D8A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		3D Compatibility (PKB) -160352 for 2016 contacts (-79.5/contact) +
2D Compatibility (PS) -26404 + (NN) -15005 + (LL) 1980
1D Compatibility (HY) -20800 + (ID) 4150
Total energy: -224731.0 ( -111.47 by residue)
QMean score : 0.492

(partial model without unconserved sides chains):
PDB file : Tito_4D8A.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4D8A-query.scw
PDB file : Tito_Scwrl_4D8A.pdb: