Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNELLHLAPNVWPRNTTRDEVGVVCIAGIPLTQLAQEYGTPLFVIDEDDFRSRCRETAAAFG-SGANVHYAAKAFLCSEVARWISEEGLCLDVCTGGELAVALHASFPPERITLHGNNKSVSELTAAVKAGVGHIVVDSMTEIERLDAIAGEAGIVQDVLVRLTVGVEAHTHEFISTAHEDQKFGLSVASGAAMAAVRRVFATDHLRLVGLHSHIGSQIFDVDGFELAAHRVIGLLRDVVGEFGPEKTAQIATVDLGGGLGISYLPSDDPPPIAELAAKLGTIVSDESTAVGLPTPKLVVEPGRAIAGPGTITLYEVGTVKDVDVSATAHRRYVSVDGGMSDNIRTALYGAQYDV--RLVSRVSDAPPVPARLVGKHCESGDIIVRDTWVPDDIRPGDLVAVAATGAYCYSLSSRYNMVGRPAVVAVHAGNARLVLRRETVDDLLSLEVR |
| 3VAB Chain:A ((29-437)) | -------------------RNGVLHAENVSLPEIAKAVGTPFYVYSRATIERHFRVFHDAFADMDTLVTYALKANSNQAVLTALAKLGAGADTVSQGEIRRALAAGIPANRIVFSGVGKTPREMDFALEAGIYCFNVESEPELEILSARAVAAGKVAPVSLRINPDVDAKTHAKI---KSENKFGIPRDKAR--AAYARAASLPGLNVVGIDMHIGSQIIDLEPFDNAFALMAELVKELQA-----DGHNIRHVDVGGGLGIPYRTP--PPPPVAYAQIVAKHIKP-------LGLKTVFEPGRLIVGNAGLLVTEVIFVKEGD-----AKNFVIVDAAMNDLIRPTLYDAFHDIRPVIMPN-DNAPRIRADFVGPVCETGDYLGLDREVA-KPAPGDLIAICTTGAYGAVLSSTYNSRLLIPEVLGDGERYHVVRPRRTYEELLALD-- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3VAB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -300848 for 3427 contacts (-87.8/contact) +
2D Compatibility (PS) -42874 + (NN) -13008 + (LL) 2860
1D Compatibility (HY) -22000 + (ID) 6950
Total energy: -382820.0 ( -111.71 by residue)
QMean score : 0.539
|
|
|