Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MITATDLEVRAGARILLAPDGPDLRVQPGDRIGLVGRNGAGKTTTLRILAGEVEPYAGSVTR-AGEIGYLPQDPKVGDLDVLARDRVLSARGLDVLLTDLEKQQALMAEVADEDERDRAIRRYGQLEERFVALGGYGAESEAGRICASLGLPERVLTQRLRTLSGGQRRRVELARILFAASESGAGNSTTLLLDEPTNHLDADSLGWLRDFLRLHTGGLVVISHNVDLVADVVNKVWFLDAVRGQVDVYNMGWQRYVDARATDEQRRIRERANAERKAAALRAQAAKLGAKATKAVAAQNMLRRADRMMAALDEERVADKVARIKFPTPAACGRTPLVANGLGKTYGS--LEVFTGVDLAIDRGSRVVILGLNGAGKTTLLRLLAGVEQPDTGVLEPGYGLRIGYFAQEHD-TLD--NDATVWENVRHAA----------------------------------------------------------------------P-------------------------------------DAGEQDLRGLLGAFMFTGPQ-LEQPAGTLSGGEKTRLALAGLVASTANVLLLDEPTNNLDPASREQVLDALRSYRGAVVLVTHDPGAAAALGPQRVVLLPDGT-EDYWSDEYRDLIELA |
| 2IW3 Chain:A ((440-979)) | -----EFSLAYGAKILL--NKTQLRLKRARRYGICGPNGCGKSTLMRAIANGQV--DGFPTQEECRTVYVEHDIDGTHSDTSVLDFVFES---------G-----------------------------------VGTKEAIKDKLIEFGFTDEMIAMPISALSGGWKMKLALARAVLRN-------ADILLLDEPTNHLDTVNVAWLVNYLNTCGITSITISHDSVFLDNVCEYIINYEG--LKLRKYKGNFTEFVKKCPAAK-----A-------YEELS---N--------------T----DLEFK---FPE----PGY--LEGVKTKQKAIVKVTNMEFQYPGTSKPQITDINFQCSLSSRIAVIGPNGAGKSTLINVLTGELLPTSGEVYTHENCRIAYIKQHAFAHIESHLDKTPSEYIQWRFQTGEDRETMDRANRQINENDAEAMNKIFKIEGTPRRIAGIHSRRKFKNTYEYECSFLLGENIGMKSERWVPMMSVDNAWIPRGELVESHSKMVAEVDMKEALASGQFRPLTRKEIEEHCSMLGLDPEIVSHSRIRGLSGGQKVKLVLAAGTWQRPHLIVLDEPTNYLDRDSLGALSKALKEFEGGVIIITHSAEFTKNLTEE-VWAVKDGRMTPS------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2IW3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -250808 for 3773 contacts (-66.5/contact) +
2D Compatibility (PS) -45625 + (NN) -19913 + (LL) 9636
1D Compatibility (HY) -23200 + (ID) 5300
Total energy: -335210.0 ( -88.84 by residue)
QMean score : 0.435
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