Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLGRLRGGYQVEGREVTPTQLLERLGFRRDQLSARVDDLSGGQRRRLQLMLTLLSEPNVLLLDEPTNDVDTE----MLTATEDLLDSWAGTLIVVSHDRYLLERVTDQQYAILDDRLRHLPGGIDEYLQLAARVSAPAPAERPAPPAMSGAQRRATEKELAAVDRQLARLADRVAAKHTELAEHDQSDHVGITRLTQQLRVLQDHVAAMENRWLELSEMLE
3BK7 Chain:A ((453-552))
------------------TELLKPLGII-DLYDRNVEDLSGGELQRVAIAATLLRDADIYLLDEPSAYLDVEQRLAVSRAIRHLMEKNEKTALVVEHDVLMIDYVSDRLIVFEGEPGRH------------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3BK7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -41176 for 566 contacts (-72.7/contact) +
2D Compatibility (PS) -10508 + (NN) -6854 + (LL) 9516
1D Compatibility (HY) -8400 + (ID) 1700
Total energy: -59122.0 ( -104.46 by residue)
QMean score : 0.408
(partial model without unconserved sides chains):
PDB file :
Tito_3BK7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3BK7-query.scw
PDB file :
Tito_Scwrl_3BK7.pdb
: