Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLTSHGFSRAAVVGAGLMGRRIAGVLASAGLDVAITDTNAEIL------------HAAAVEAARVAGAGR-------GSVAAAADLAAAIPDADLVIEAVVENLAVKQELFERLATLAPD-AVLATNTSVLPIGAVTERVEDGSRVIGTHFWNPPDLIPVVEVVPSARTAPDTADRVVALLTQVGKLPVRVGRDVPGFIGNRLQHALWREAIALVAEGVCDPKTVDLVVRNTIGLRLATLGPLENADYIGLDLTLAIHDAVIPSLNHDP--HPSPLLRELVAAGQLGARTGHGFLDWPAGAREATTARLAQHIAAQLQANEKGRGT |
| 1M76 Chain:B ((20-301)) | -----------VIGGGLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLSTIATSTDAASVVHSTDLVVEAIVENLKVKNELFKRLDKFAAEHTIFASNTCSLQITSIANATTRQDRFAGLHFFNPVPVMKLVEVIKTPMTSQKTFESLVDFSKALGKHPVSC-KDTPGFIVNRLLVPYLMEAIRLYERGDASKEDIDTAMKLGAGY---PMGPFELLDYVGLDTTKFIVDGWHEMDAENPLHQPSPSLNKLVAENKFGKKTGEGFYKY----------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1M76.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -142814 for 2064 contacts (-69.2/contact) +
2D Compatibility (PS) -28605 + (NN) -13664 + (LL) 3124
1D Compatibility (HY) -18800 + (ID) 4950
Total energy: -205709.0 ( -99.67 by residue)
QMean score : 0.397
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