Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-MKVRLDPSRCVGHAQCYAVDPDLFPIDDSGNSILA------EHEVRPEDMQLTRDGVAACPEMALILEEDDAD-------
1WTF Chain:A ((1-81))
PKYTIVDKETCIACGACGAAAPDIYDYDEDGIAYVTLDDNQGIVEVPDILIDDMMDAFEGCPTDSIKVADEPFDGDPNKFE
General information:
TITO was launched using:
RESULT:
Template:
1WTF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -29420 for 467 contacts (-63.0/contact) +
2D Compatibility (PS) -7182 + (NN) -4951 + (LL) 0
1D Compatibility (HY) -3200 + (ID) 700
Total energy: -45453.0 ( -97.33 by residue)
QMean score : 0.564
(partial model without unconserved sides chains):
PDB file :
Tito_1WTF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1WTF-query.scw
PDB file :
Tito_Scwrl_1WTF.pdb
: